Selected Publications

• Chen, R. J., et al, "Influence of polymer flexibility on nanoparticle dynamics in semidilute solutions." Soft Matter 15(6): 1260-1268., 2019
• Howard, M. P., et al., "Modeling hydrodynamic interactions in soft materials with multiparticle collision dynamics." Current Opinion in Chemical Engineering 23: 34-43., 2019
• Kim, S. B., Palmer, J. C., & Debenedetti, P. G., "Computational investigation of cold denaturation in the Trp-cage miniprotein", Proceedings of the National Academy of Sciences of the United States of America, 113(32), 8991-8996 [DOI], 2016
• Palmer, J. C., Martelli, F., Liu, Y., Car, R., Panagiotopoulos, A. Z., & Debenedetti, P. G., "Metastability and no criticality Reply", Nature, 531(7593), E2-E3., 2016
• Palmer, J. C., Singh, R. S., Chen, R. J., Martelli, F., & Debenedetti, P. G., Density and bond-orientational relaxations in supercooled water. Molecular Physics, 114(18), 2580-2585 [DOI], 2016
• J. C. Palmer and P. G. Debenedetti, “Recent Advances in Molecular Simulation: A Chemical Engineering Perspective,” AIChE Journal, 61, 370-383 [DOI], 2015
• S. B. Kim, J. C. Palmer and P. G. Debenedetti, “A Computational Study of the Effect of Matrix Structural Order on Water Sorption by Trp-Cage Miniproteins,” Journal of Physical Chemistry B, 119, 1847-185 [DOI], 2015
• J. C. Palmer, F. Martelli, Y. Liu, R. Car, A. Z. Panagiotopoulos and P. G. Debenedetti, “Metastable Liquid-Liquid Transition in a Molecular Model of Water,” Nature, 510, 385-388 [DOI], 2014
• V. Holten, J. C. Palmer, P. H. Poole. P. G. Debenedetti and M. A. Anisimov, “Two-State Thermodynamic Model of the ST2 Model for Supercooled Water,” Journal of Chemical Physics, 140, 104502 [DOI], 2014
• J. C. Palmer, R. Car and P. G. Debenedetti, “The Liquid-Liquid Transition in Supercooled ST2 Water:  A Comparison Between Umbrella Sampling and Well-Tempered Metadynamics,” Faraday Discussion, 167, 77-94 [DOI], 2013
• S. O. Diallo, M. Jażdżewska, J. C. Palmer, E. Mamontov, K. E. Gubbins and M. Śliwińska-Bartkowiak, “Dynamics of Nanoconfined Water Under Pressure,” Physical Review E, 88, 022316 [DOI], 2013
• Y. Long, J. C. Palmer, B. Coasne, M. M Śliwinska-Bartkowiak, G. Jackson, E. A. Müller and K. E. Gubbins, “On the Molecular Origin of High-Pressure Effects in Nanoconfinement: The Role of Surface Chemistry and Roughness,” Journal of Chemical Physics, 139, 144701[DOI], 2013
• J. C. Palmer and K. E. Gubbins, “Atomistic Models for Disordered Nanoporous Carbons Using Reactive Force Fields,” Microporous and Mesoporous Materials, 154, 24-37 [DOI], 2012
• J. C. Palmer and P. G. Debenedetti, “Computer Simulation of Water Sorption on Flexible Protein Crystals,” Journal of Physical Chemistry Letters, 3, 2713-2718 [DOI], 2012
• K. A. Phillips, J. C. Palmer and K. E. Gubbins, “Analysis of the Solvation Structure of Rubidium Bromide under Nanoconfinement,” Molecular Simulation, 38, 1209-1220 [DOI], 2012
• M. Sliwinska-Bartkowiak, H. Drozdowski, M. Kempinski, M. Jazdzewska, Y. Long, J. C. Palmer, and K. E. Gubbins, “Structural Analysis of Water and Carbon Tetrachloride Adsorbed in Activated Carbon Fibres,” Physical Chemistry Chemical Physics, 14, 7145-7153 [DOI], 2012
• Y. Liu, J. C. Palmer, A. Z. Panagiotopoulos and P. G. Debenedetti, “Liquid-Liquid Transition in ST2 Water,” Journal of Chemical Physics, 137, 214505 [DOI], 2012
• Y. Long, J. C. Palmer, B. Coasne, M. Sliwinska-Bartkowiak and K. E. Gubbins, “Under Pressure: Quasi-High Pressure Effects in Nanopores,” Microporous and Mesoporous Materials, 154, 19-23 [DOI], 2012
• Y. Long, M. Śliwińska-Bartkowiak, H. Drozdowski, M. Kempiński, K. A. Phillips, J. C Palmer and K. E. Gubbins, “High Pressure Effect In Nanoporous Carbon Materials: Effects of Pore Geometry,” Colloids and Surfaces A, 437, 33-41 [DOI], 2012
• J. C. Palmer, J. D. Moore, J. K. Brennan and K. E. Gubbins, “Simulating Local Adsorption Isotherms in Models of Complex Porous Materials: A Direct Assessment of the Slit Pore Model,” Journal of Physical Chemistry Letters, 2, 165-169 [DOI], 2011
• J. C. Palmer, J. D. Moore, J. K. Brennan and K. E. Gubbins, “Adsorption and Diffusion of Argon in Disordered Nanoporous Carbons,” Adsorption, 17, 189-199 [DOI], 2011
• J. C. Palmer, J. D. Moore, T. J. Roussel, J. K. Brennan and K. E. Gubbins, “Adsorptive Behavior of CO2, CH4 and Their Mixtures in Carbon Nanospace: A Molecular Simulation Study,” Physical Chemistry Chemical Physics, 13, 3985-3996 [DOI], 2011
• K. E. Gubbins, Y-C Liu, J. D. Moore and J. C. Palmer, “The Role of Molecular Modeling in Confined Systems: Impacts and Prospects,” Physical Chemistry Chemical Physics, 13, 58-85 [DOI], 2011
• Y. Long, J. C. Palmer, B. Coasne, M. Sliwinska-Bartkowiak and K. E. Gubbins, “Pressure Enhancement in Nanopores: A Major Confinement Effect,” Physical Chemistry Chemical Physics, 13, 17163-17170 [DOI], 2011
• J. C. Palmer, A. Llobet, S-H Yeon, J. E. Fischer, Y. Shi, Y. Gogotsi and K. E. Gubbins, “Modeling the Structural Evolution of Carbide-Derived Carbons Using Quenched Molecular Dynamics,” Carbon, 48, 1116-1123 [DOI], 2010
• J. D. Moore, J. C. Palmer, Y-C Liu, T. J. Roussel, J. K. Brennan and K. E. Gubbins, “Adsorption and Diffusion of Argon Confined in Ordered and Disordered Microporous Carbons,” Applied Surface Science, 256, pp. 5131-5136 [DOI], 2010